Below is a working checklist of Mount Desert Island's monilophytes.
Please send corrections and updates to info@vfthomas.com. Photographs are welcome. Thank you.
| Family | Genus | Specific Epithet | authority | Sub-specific Epithet | authority | common name | Sources (full citations given after this table) |
| Aspleniaceae | Asplenium | trichomanes | L. | ssp. trichomanes |   | maidenhair spleenwort | Greene et al. (2005) |
| Blechnaceae | Woodwardia | virginica | (L.) Smith |   |   | Virginia chain fern | Greene et al. (2005) |
| Dennstaedtiaceae | Dennstaedtia | punctilobula | (Michx.) T. Moore |   |   | eastern hay-scented fern (leaves; veins; false indusia) |
Champlainer (TFV); Greene et al. (2005) |
| Dennstaedtiaceae | Pteridium | aquilinum | (L.) Kuhn | ssp. latiusculum | (Desv.) Hultén | bracken fern | Champlain Project (2007); Greene et al. (2005) |
| Dryopteridaceae | Dryopteris | campyloptera | (Kunze) Clarkson |   |   | mountain wood fern | Champlain Project (2007); Greene et al. (2005) |
| Dryopteridaceae | Dryopteris | carthusiana | (Vill.) H. P. Fuchs |   |   | spinulose wood fern | Greene et al. (2005) |
| Dryopteridaceae | Dryopteris | cristata | (L.) Gray |   |   | crested wood fern | Greene et al. (2005) |
| Dryopteridaceae | Dryopteris | intermedia | (Muhl. ex Willd.) Gray |   |   | evergreen wood fern | Champlain Project (2007); Greene et al. (2005) |
| Dryopteridaceae | Dryopteris | marginalis | (L.) Gray |   |   | marginal wood fern (plant; leaflets; lower [spore-bearing] surface; sori) |
Champlain Project (2007); Greene et al. (2005) |
| Dryopteridaceae | Polystichum | acrostichoides | (Michx.) Schott |   |   | Christmas fern (plants; leaflets; scales) |
Champlain Project (2007); Greene et al. (2005) |
| Equisetaceae | Equisetum | arvense | L. |   |   | field horsetail | Champlainers (TFV, EMW); Greene et al. (2005) |
| Equisetaceae | Equisetum | fluviatile | L. |   |   | river horsetail | Greene et al. (2005) |
| Equisetaceae | Equisetum | sylvaticum | L. |   |   | wood horsetail | Champlainers (AH, TFV); Greene et al. (2005) |
| Onocleaceae | Onoclea | sensibilis | L. |   |   | sensitive fern | Champlain Project (2007); Greene et al. (2005) |
| Ophioglossaceae | Botrychium | virginianum | (L.) Sw. |   |   | rattlesnake fern | Greene et al. (2005) |
| Ophioglossaceae | Ophioglossum | pusillum | Raf. |   |   | northern adder's-tongue fern | Greene et al. (2005) |
| Osmundaceae | Osmunda | claytoniana | L. |   |   | interrupted fern | Champlain Project (2007); Greene et al. (2005) |
| Osmundaceae | Osmunda | regalis | L. | var. spectabilis | (Willd.) Gray | royal fern (leaf; sporangia [spore-bearing structures]; close-up of sporangia;) |
Champlainer (TFV); Greene et al. (2005) |
| Osmundaceae | Osmundastrum | cinnamomeum | (L.) C. Presl |   |   | cinnamon fern | Champlain Project (2007); Greene et al. (2005) as Osmunda cinnamomea |
| Polypodiaceae | Polypodium | appalachianum | Haufler & Windham |   |   | Appalachian polypody | Greene et al. (2005) |
| Polypodiaceae | Polypodium | virginianum | L. |   |   | rock polypody | Greene et al. (2005) |
| Pteridaceae | Adiantum | pedatum | L. |   |   | northern maidenhair fern | Greene et al. (2005) |
| Thelypteridaceae | Parathelypteris | noveboracensis | (L.) Ching |   |   | New York fern | Champlain Project (2007); Greene et al. (2005) as Thelypteris noveboracensis |
| Thelypteridaceae | Phegopteris | connectilis | (Michx.) Watt |   |   | long beech fern (leaves; veins; sori) |
Champlain Project (2007); Greene et al. (2005) |
| Thelypteridaceae | Thelypteris | palustris | Schott | var. pubescens | (Lawson) Fern. | marsh fern | Greene et al. (2005) |
| Woodsiaceae | Athyrium | angustum | (Willd.) C. Presl |   |   | narrow lady fern (plant; leafules; sori; veins; scales) |
Champlainer (TFV); Greene et al. (2005) as Athyrium filix-femina var. angustum |
| Woodsiaceae | Cystopteris | fragilis | (L.) Bernh. |   |   | fragile fern | Greene et al. (2005) |
| Woodsiaceae | Deparia | acrostichoides | (Sw.) M. Kato |   |   | silvery false spleenwort | Greene et al. (2005) |
| Woodsiaceae | Gymnocarpium | dryopteris | (L.) Newman |   |   | northern oak fern | Champlainer (TFV); Greene et al. (2005) |
| Woodsiaceae | Woodsia | ilvensis | (L.) R. Br. |   |   | rusty cliff fern | Champlainer (TFV); Greene et al. (2005) |